Gene Expression Heterogeneity in the Maintenance and Coordinated Differentiation of Neuromesodermal Progenitors in vivo (360G-Wellcome-109408_Z_15_D)
Modern imaging data in biology is essentially multi-scalar in that raw image data undergoes a series of processing steps until it is at a manageable size to perform quantification and analysis. While this processing pipeline might be beneficial to one set of scientific questions, it may be inappropriate to others. Computational biologists may be interested in improving the pipeline itself, while other researchers may be interested in accessing the already processed data. Thus, a central road-block in the open sharing of large-scale imaging data is the fact that there is no one size fits all solution. This project aims to generate a web-based database that stores experimental and data descriptors together with links to the raw and processed data files. This will greatly enhance our ability to upload this data to repositories that are based placed to share the datasets in question, from the raw unprocessed data files down to feature extracted and processed data. Upon submission, the website will link to the deposited data and thereby act as an integrated platform for other researchers to access and explore the data that is available to them. Thus, researchers will be able to access our data at all levels. In built in the project is a second evaluation phase, whereby will we reach out to collaborating laboratories to assess the effectiveness of our open research platform. These will include computational biologists interested in accessing raw data files and processing pipelines, and other developmental biologists who will interact with processed datasets.
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Grant Details
Amount Awarded | 48563 |
Applicant Surname | Steventon |
Approval Committee | Research Enrichment, Open Research |
Award Date | 2018-08-08T00:00:00+00:00 |
Financial Year | 2017/18 |
Grant Programme: Title | Research Enrichment - Open Research |
Internal ID | 109408/Z/15/D |
Lead Applicant | Dr Ben Steventon |
Partnership Value | 48563 |
Planned Dates: End Date | 2021-07-01T00:00:00+00:00 |
Planned Dates: Start Date | 2019-07-01T00:00:00+00:00 |
Recipient Org: Country | United Kingdom |
Region | East of England |